Manuscript: Differences in the expression of cortex-wide neural dynamics are related to behavioral phenotype PART 1

Widefield imaging data for manuscript: 

Differences in the expression of cortex-wide neural dynamics are related to behavioral phenotype. 

The zipped files contain widefield imaging data from 105 twelve-minute recordings. Each recording was chunked into 3, four-minute chunks for analysis, resulting in 315 .mat files labeled according to mouse ID and recording date. Within each .mat file are three variables 'data_train','data_test','nanpxs'. data_train and data_test are pixel x timepoint matrices corresponding to two-minutes of data. nanpxs are the masked pixels. Thus, to recreate 2 minutes of preprocessed and deconvolved widefield movies you can use the following (see associated github in the manuscript for matlab functions). 

data= conditionDffMat(data_train',nanpxs); %this converts the pixel x timepoint matrix into a pixel x pixel x timepoint tensor for visualization. 

figure;

for i = 1:size(temp,3)

imagesc(data(:,:,i),[0 0.3]);

colormap magma

pause(0.01)

end