Evidence for a putative isoprene reductase in Acetobacterium wieringae

Supplementary Tables from "Evidence for a putative isoprene reductase in Acetobacterium wieringae".

Table S1: Average nucleotide identity (ANI) between enriched Comamonas sp. ISORED-1 and close relative genomes available on NCBI and average amino acid identity (AAI) pairwise comparisons.
Table S2: Average nucleotide identity (ANI) between enriched A. wieringae ISORED-2 and close relative genomes available on NCBI and average amino acid identity (AAI) pairwise comparisons.
Table S3: Primer sequences used for RT-PCR to amplify the intergenic regions of the putative  isr operon.
Table S4: Annealing temperatures of primer pairs used to amplify the intergenic regions of the putative isoprene operon and their predicted product sizes.
Table S5: List of complete Acetobacterium genomes used for pangenome analysis with anvi'o.
Table S6: Summary of shared and unique gene cluster within Acetobacterium genus. Based on an MCL inflation value of 6.
Table S7: List of 352 unique proteins encoded in the A. wieringae ISORED-2 genome. Shown are NCBI BLASTp results of each protein.
Table S8: Sequence information of IsrA homologs represented in the phylogenetic tree (Figure 4AB).
Table S9: Sequence information of clade 9 proteins used in the phylogenetic tree (Figure 4C and Figure S4).
Table S10: InterProScan results of proteins encoded in the isr operon (VUZ27132.1-VUZ27136.1) and characterized NfnB subunits.
Table S11: List of Comamonas sp. ISORED-1 proteins identified in the proteomic analysis.
Table S12: EFI-GNT - Genome Neighbourhood Networks (GNNs) computation results of proteins from the putative isr operon (VUZ27132.1-VUZ27136.1).