Top 10 amino acid residues of the small-scale mutation group whose 31-mers did not align to the PAO1 genome.

Top 10 amino acid residues according to Pyseer results whose 31-mers did not align to the PAO1 genome are shown. Reference proteins from genomes other than PAO1 and the PAO1 homolog of this reference protein are presented in columns ‘protein’ and ‘homolog’. The ‘locus’ indicates the mutation and amino acid of the reference protein where the mutation is detected. Multiple types of mutation at each locus of the reference protein may be present and detailed information is provided in S3 Data. The reference protein name in the “protein” column is composed of the genome id, connected by the latter underscore sign, to gene number within that genome. All sequences of the reference proteins in Table 3 are provided in S4 Data.