This dataset contains the training, validation, and test data used for transcription factor (TF)–DNA binding prediction in the TFBindFormer framework. It integrates genomic DNA sequence bins with tran
This file contains the source data for Extended Data Figure 1c. c, Hi-C matrix (at 5 kb resolution) and loops at the MRR1 region showing two looping silencers (S1 and S2) that exhibit chromatin intera
Additional file 5: Table S4. ChIP peaks (32731) overlapping with UCSC CpG islands. List of CpG islands were obtained from UCSC table browser and used to find overlaps with 32731 HILS1 ChIP peaks using
