Genotyping of known SNPs from dbSNP 141 using the VCF and gVCF file formats and the number of homozygous reference sites and no-calls based on WGS data.
Additional file 3:PCR and oligonucleotide probes used in the Sequenom MassARRAY platform for SNP typing. List of SNP loci genotyped using the Sequenom MassARRAY platform. The PCR primers, the oligonuo
*Largest isoform.†CEU population, minor allele frequency (MAF)>0.05, largest isoform of gene plus 5 kb upstream and downstream, based on HapMap data rel #24 phase II/Nov 08, on NCBI B36 assembly, dbSN
