five

Sequence data for annotation and scaffolding of the Lathyrus sativus LS007 Rbp1.0 genome assembly. Sequence data for annotation and scaffolding of the Lathyrus sativus LS007 Rbp1.0 genome assembly

收藏
NIAID Data Ecosystem2026-03-14 收录
下载链接:
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA929208
下载链接
链接失效反馈
官方服务:
资源简介:
This dataset includes RNAseq data of 7 tissues/developmental stages of Lathyrus sativus genotype LSWT11 and 2 tissues with drought- and well-watered treatments of Lathyrus sativus genotypes LS007 and Mahateora. These data were used in the functional annotation pipeline of the Rbp1.0 genome assembly of LS007. The multi-tissue transcriptome was also used to support gene candidate identification by mRNA abundance. Also included is Hi-C sequencing data used to scaffold the assembly into pseudochromosomes Overall design: RNAseq data to inform a genome annotation pipeline - replication of multi-tissue transcriptome as shown below, three replicates for each genotype/treatment combination in drought experiment; RNAseq for RNA read counting to support gene candidate identification, replication as shown below, HiC for scaffolding of genome assembly
创建时间:
2023-01-29
二维码
社区交流群
二维码
科研交流群
商业服务