Characteristics of alignments.
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*The two numbers in this column denote the number of positions in each alignment that retain phylogenetic information (entropy > 0) and that have none (entropy = 0) after deleting gap-containing sites;**k1 values give the transition∶transversion rate ratio for purines; k2 values do the same for pyrimidines. The overall transition/transversion bias is R = [A*G*k1 + T*C*k2]/[(A+G)*(T+C)];***statistical richness estimator [67],****Shannon-Wiener diversity index [66].
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2015-12-02
