DISTEMIST gazetteer

<strong>Please, cite use:</strong> Miranda-Escalada, A., Gascó, L., Lima-López, S., Farré-Maduell, E., Estrada, D., Nentidis, A., Krithara, A., Katsimpras, G., Paliouras, G., &amp; Krallinger, M. (2022). Overview of DisTEMIST at BioASQ: Automatic detection and normalization of diseases from clinical texts: results, methods, evaluation and multilingual resources. <em>Working Notes of Conference and Labs of the Evaluation (CLEF) Forum. CEUR Workshop Proceedings</em> <pre><code>@article{miranda2022overview, title={Overview of DisTEMIST at BioASQ: Automatic detection and normalization of diseases from clinical texts: results, methods, evaluation and multilingual resources}, author={Miranda-Escalada, Antonio and Gascó, Luis and Lima-López, Salvador and Farré-Maduell, Eulàlia and Estrada, Darryl and Nentidis, Anastasios and Krithara, Anastasia and Katsimpras, Georgios and Paliouras, Georgios and Krallinger, Martin}, booktitle={Working Notes of Conference and Labs of the Evaluation (CLEF) Forum. CEUR Workshop Proceedings}, year={2022} }</code></pre> The DISTEMIST gazetteer contains main terms and synonyms from the relevant branches of Snomed-CT for the grounding of disease mentions. There are mentions belonging to Snomed-CT hierarchies such as disorder, finding, or morphological abnormality. The DISTEMIST Gazetteer is also used as an <strong>additional resource</strong> in the <strong>SocialDisNER task.</strong> <strong>Format</strong> Tab-separated file with the following columns: code: Snomed-CT ID language term: string mention semantic_tag: Snomed-CT hierarchy mainterm: binary field, indicating whether the term is a main term, or not <strong>DISTEMIST resources:</strong> <strong>Web</strong> <strong>DISTEMIST Gold Standard</strong> <strong>DISTEMIST annotation guidelines</strong> <strong>SocialDisNER resouress:</strong> <strong>Web</strong> <strong>SocialDisNER corpora</strong> For further information, please visit https://temu.bsc.es/livingner/ or email us at [e-mail]