Additional file 3: Table S3. of The link between adjacent codon pairs and mRNA stability

Test for association of the inhibitory codon pairs with mRNA synthesis/decay rate, protein abundance per mRNA, ribosome occupancy, and protein decay rate. (A) Spearmanâ s correlation and partial correlation coefficients to assess associations between the fraction of the inhibitory codon pairs and the gene expression variables. P values obtained according to Kim [16] and those based on permutation tests are shown. (B) Same as (A) but for Kendallâ s correlation coefficients. (C) Same as (A) but for the presence/absence of the inhibitory codon pairs. (D) Same as (B) but for the presence/absence of the inhibitory codon pairs. (XLSX 54Â kb)