Grayling draft genome dataset
收藏DataCite Commons2025-06-01 更新2024-07-27 收录
下载链接：
https://figshare.com/articles/dataset/Grayling_draft_genome_dataset/5135257/1
下载链接
链接失效反馈官方服务：
资源简介：
###### Description<br><br>Tthymallus_scaffolds.fasta - Assembled scaffold sequences<br>Tthymallus_RepeatLibrary_deNovo.fasta - De novo repeat library sequences<br>Tthymallus_transcriptome_DeNovo.fasta - De novo transcriptome assembly using Trinity (followed by RSEM based filtering)<br>Tthymallus_transcriptome_ReferenceBased.fasta - Reference-based transcriptome using STAR-Cufflinks-transdecoder pipeline (followed by filtering based on homology to known proteins from zebrafish and stickleback proteins.<br>Tthymallus_ScaffoldAnnotation.gff3 - MAKER pipeline based annotation for the scaffolds.<br>Tthymallus_proteins.fasta - Grayling protein sequences used for inferring orthologous groups (based on MAKER annotations)<br>Tthymallus_maker_fullOutput.gff - Full output from MAKER<br>Tthymallus_CPMcounts.txt - Expression counts for grayling<br>OrthologousGroups.txt - Inferred orthologous groups using Orthofinder<br><br><br>
提供机构：
figshare
创建时间：
2017-06-22
