Supplementary Methods, Figures and Tables;Phylogenetic datasets used in our analyses. Each dataset is a nexus file including a tree distribution with 100 trees (except for planktonic foraminifera).

NIAID Data Ecosystem40

SMT Metagenome Prokka Annotation Output

基因组注释

Output files from the annotation of assembled metagenomic contigs from the SMT metagenome using Prokka.

Figshare2023-04-11 更新40

Effect of phylogenetic diversity on strain colonization success from seed to seedling

微生物定殖

系统发育多样性

Bacterial synthetic communities (SynComs) were inoculated on bean seeds. These SynComs were designed using a gradient of phylogenetic diversity. We performed amplicon sequencing on the gyrB gene to ch

NIAID Data Ecosystem10

Phylogenetic diversity of core rumen microbiota as described by cryo-ET

瘤胃微生物基因组

系统发育多样性

genomes of gut bacterial isolates

NIAID Data Ecosystem40

数据为：人为干扰导致功能的聚集和系统发育过度分散在森林群落之三峡库区峡库区

森林生态干扰

系统发育多样性

支持“人为干扰导致功能的聚集和系统发育过度分散在森林群落之三峡库区已上传。2016 年调查的 123 个样地的数据包含从实地调查和计算中收集的所有数据。另一个名为 “Speices list” 的文件是所有调查物种的列表。如果您对此数据文件有任何疑问，请联系作者。我们愿意与任何人合作。

Figshare2025-02-12 更新20