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Basic kinetic model of Escherichia coli's electron transport chain (ETC)

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细菌电子传递链动力学模型

大肠杆菌代谢

数据链接：

https://www.omicsdi.org/dataset/fairdomhub/16 数据链接链接失效反馈

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资源简介：

Basic kinetic model of Escherichia coli's electron transport chain (ETC)

应用场景：

创建时间：

2011-03-04

基因组规模代谢模型

大肠杆菌代谢

Archer2011 - Genome-scale metabolic model of Escherichia coli (iCA1273) This model is described in the article: The genome sequence of E. coli W (ATCC 9637): comparative genome analysis

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pH and electrical potential in each compartment of the E. coli reconstruction iAF1260.

代谢建模

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Electrical potential in each compartment is relative to electrical potential in the cytosol. Temperature was set to 310.15 K (37°C), and ionic strength was assumed to be 0.25 M [14] in all compartment

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Comparison of predicted and experimental concentrations for some E. coli metabolites.

代谢物浓度

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aAbbreviations: 13DPG, 1,3-diphosphoglycerate; 2PG, 2-phospho-D-glycerate; 3PG, 3-phospho-D-glycerate; 3PHP, 3-phospho-hydroxypyruvate; DHAP, dihydroxyacetone phosphate; F6P, D-fructose-6-phosphate; G

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Expression profiling of multiple Escherichia coli strains on glucose minimal media

细菌基因表达分析

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RNA sequencing was performed on multiple E. coli strains grown on glucose minimal media Growth of E. coli with various supplements was performed with biological duplicates

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MOESM1 of Towards creating an extended metabolic model (EMM) for E. coli using enzyme promiscuity prediction and metabolomics data

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酶混杂性预测

Additional file 1. Listing of derivatives that were predicted by PROXIMAL and had a chemical ID in PubChem.

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