Summary of allele-specific hypersensitivity SNPs.

Each row represents a category that is a subset of the category in the previous row. Each column reports the number of heterozygous SNPs, SNPs displaying significant ASH (20% FDR), and the estimated proportion of non-null hypotheses using Storey’s q-value approach. In parentheses are reported the numbers for SNPs that are not present in any of the subsequent subsets and are the basis for our partitioned q-value approach to detect ASH-hSNPs.