The nature of the Last Universal Common Ancestor and its impact on the early Earth system

Supplementary data for the manuscript:The nature of the Last Universal Common Ancestor and its impact on the early Earth systemGene_Fastas contains the individual gene sequences, alignments and trimmed alignments for the reconciliation analyses, also included are the fasta files for the COG based reconciliationSpecies_Tree includes alignments, sequences, trees and concatenation fastas for the species tree inference, as well as the files involved in the recoding, domain and rooting testsTemperature_genes includes the optimal temperature inference test found in the supplementary materialGenome_Size_Number_estimates includes the files used to predict the genome size and number of proteins in LUCASubsample_test includes the files for the subsampled reconciliation testsTaxonomy includes the taxonomic information for each of the genomes<br><br>COG_OR_reconciliation includes the scripts and input/ouput needed for the COG functional category based optimization for the reconciliation files (as well as the fraction_missing per genome data), due to the size of the rec files, these are available here: https://data.bris.ac.uk/data/dataset/405xnm7ei36d2cj65nrirg3ip