Polymorphism data for each of the six Galloanserae species

Contains a vcf file for each of the six species. APL = Anas platyrhynchos, ACY = Anser cygnoides, MGA = Meleagris gallopavo, NME = Numida meleagris, PCO = Phasianus colchicus, PCR = Pavo cristatus. Polymorphism data was obtained by first mapping RNA-seq reads to orthogroups using the two pass alignment method of the STAR aligner with default parameters (Dobin et al. 2013). SNPs were called using varscan v2.3.6 (Koboldt et al. 2009; Koboldt et al. 2012) and Samtools (Li et al. 2009) following the recommendations of Quinn et al 2013 (Quinn et al. 2013).