Representative sequences for colorectal cancer additive log ratios
收藏NIAID Data Ecosystem2026-03-14 收录
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https://zenodo.org/record/7696882
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资源简介：
Representative sequences and corresponding feature rank tables calculated in Debelius et al, The local tumor microbiome is associated with survival in late-stage colorectal cancer patients (doi: https://doi.org/10.1101/2022.09.16.22279353)
file_s1_tissue_alr_sequences.fasta goes with tissue_only_ranks.tsv and corresponds to Figure 1 in the manuscript.
file_s2_interaction_dr_sequences.fasta corresponds to figure 2 and links to interaction_models_interaction_ranks.tsv and interaction_models_tissue_ranks.tsv
file_s3_tumor_rPCA_alr_sequences.fasta corresponds to Figure 3 and links to tumor_survival_index_ranks_file3.tsv.
The rank files provide the rank and rank group; the fasta files provide the reference sequences for the data.
创建时间：
2023-03-04
