File S1 - LipidHome: A Database of Theoretical Lipids Optimized for High Throughput Mass Spectrometry Lipidomics

Supplementary file containing the following. Figure S1: The structural hierarchy of lipid identifications measurable by mass spectrometry. Figure S2: Database schema of the LipidHome database. Figure S3: The “Category” -> “Main Class” -> “Sub Class” hierarchy of lipids currently stored in the LipidHome database. Figure S4: Diagram that shows how lipids (e.g. glycerophospholipids) can be split in a series of building blocks. Figure S5: Screenshot of the LipidHome “Lipid record” view. Figure S6: Screenshot of the LipidHome “MS1 Search Engine”. Note S1: Details of the LipidHome annotation pipeline and its interaction with existing resources. Note S2: Details of the LipidHome web services and their usage. (DOC)