遇见数据集

3D organoid tiny test dataset (ome-zarr)

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Zenodo2024-10-23 更新2026-05-26 收录
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资源简介:

Ome-zarr dataset that is the output of raw tifs (doi 10.5281/zenodo.10683043) processed by Fractal task (see .json file). Dataset acquired on Yokogawa CV7000 on 2022.06.04 by Nicole Repina, Friedrich Miescher Institute for Biomedical ResearchDataset contains one cropped field of view (zyx shape 50,680,535 pix) of one fluorescence channel over two multiplexed rounds of imaging (R0, R1)60x water objective, 2x2 binning, zyx spacing (0.6, 0.21667, 0.21667) um per pixelChannel C01 corresponds to DAPI nuclear stainOriginal image data was cropped to yx dimensions of 680,535 pix to reduce size, Yokogawa metadata updated accordinglyOriginal image zslice 01-19 and 70-76 (inclusive) were removed to reduce size, Yokogawa metadata updated accordingly

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Zenodo
创建时间:
2024-02-20
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