EID2_organism_interactions_raw_2022.csv
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资源简介:
EID2_organism_interactions_raw_2022.csv contains organism-organism (cargo-carrier) interactions extracted from the Enhanced Infectious Diseases Database - EID2 (https://eid2.liverpool.ac.uk/). For full description of EID2 please refer to: https://www.nature.com/articles/sdata20154.
All interactions im this file are supported by one genetic sequence or 4 or more publicaitons and is structured as follows:
1. cargo: name of cargo organism (species, subspecies or lower rank).
2. cargoID: EID2 ID of the cargo
3. cargoTaxID: NCBI taxid for the cargo
4. cargoRank: the rank of the cargo
5. cargoCategory: the taxonomic classification of the cargo (e.g., bacteria, virus, etc.)
6. carrier: name of carrier organism (species, subspecies or lower rank)
7. carrierID: EID2 ID of the carrier
8. carrierTaxID: NCBI taxid for the carrier
9. carrierRank: the rank of the carrier
10. carrierCategory: the taxonomic classification of the carrier.
11. sequencesNo: Total number of nucleotide sequences supporting the interaction.
12. papersNo: Total number of publications supporting the interaction.
创建时间:
2023-02-09



