Data for k-mer counting benchmarks
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About the files index_path_segments.fasta.gz: all sequences present in the pangenome graph generated from 462 HPRC year 2 assemblies. File was generated by the PanGenie-index command using the VCF obtained from here: https://zenodo.org/records/15223961 HG00096_ERR3240114.fasta.gz: Illumina sequencing reads of sample HG00096 (generated by 1000 Genomes Project), roughly 30x of coverage Aim: count all k-mers present in index_path_segments.fasta.gz in the reads contained in HG00096_ERR3240114.fasta.gz
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Zenodo创建时间：
2025-09-25
