Length and enrichement score comparison.

Figshare2015-12-02 更新2026-04-29 收录

ChIP-seq峰值分析

转录因子结合分析

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资源简介：

Comparison between CMT, MACS and T-PIC the average length of detected peaks and enrichment score on the FoxA1 dataset.

创建时间：

2015-12-02

Investigation of Rap1 binding occupancy in global H3-depletion condition [Rap1_ChIPseq]. Investigation of Rap1 binding occupancy in global H3-depletion condition [Rap1_ChIPseq]

转录因子结合分析

染色质免疫沉淀测序

We constructed the inducible H3-depleted and FLAG-tag of the repressor activator protein 1 (Rap1) yeasts to investigate the depleted effect of nucleosomal H3 on DNA-binding profiles of Rap1 and result

NIAID Data Ecosystem90

A ChIP-seq test dataset

ChIP-seq峰值分析

基因组学算法测试

This is a testing dataset for ChIP-seq (chromatin Immunoprecipitation sequencing) peak callers. It was made from a his-tagged tfbD pulldown in Halobacterium salinarum, sequenced on the Illumina GAII.

NIAID Data Ecosystem50

Additional file 4 of Genome-wide MNase hypersensitivity assay unveils distinct classes of open chromatin associated with H3K27me3 and DNA methylation in Arabidopsis thaliana

植物表观遗传学

转录因子结合分析

Table S3. Top 30 most enriched TFs and their binding motifs within sMHSs. (XLSX 14 kb)

Figshare2024-02-15 更新50

SMAD3 and SOX4 binding profiling in human breast cell lines. SMAD3 and SOX4 binding profiling in human breast cell lines

转录因子结合分析

乳腺癌分子机制

In order to identify genes co-bound by SOX4 and SMAD3 in the context of breast cancer, different breast cell lines (HMLEs, MDA-MB-231 or HCC-1954) were used. Due to low endogenous expression levels fo

NIAID Data Ecosystem80

EBNA3 proteins regulate EBNA2 binding to distinct RBPJ genomic sites

EBV致癌机制

转录因子结合分析

We report the application of ChIP Seq to study the Epstein Barr Virus Nuclear Antigen EBNA3A, EBNA3B, EBNA3C, an essential transcriptional regulator involved in the transformation of Resting B Lymphoc

NIAID Data Ecosystem50

Length and enrichement score comparison.

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