Phylogeographic methods aim to infer migration trends and the history of sampled lineages from genetic data. Applications of phylogeography are broad, and in the context of pathogens include the recon
This dataset contains poultry population data. Reporting authorities contributing to the data collection: AI2023_POP_DK - Danish Veterinary and Food Administration
HPAIV H5N1 viruses identified by virus isolation (VI) are indicated in parentheses, and those identified by real time reverse transcription polymerase chain reaction (PCR) are indicated in square brac
Introduction: The avian influenza (AI) virus causes a highly contagious disease which is common in wild and domestic birds and sporadic in humans. Mutations and genetic reassortments among the 8 negat
Heterogeneity in the transmission rates of pathogens across hosts or environments may produce disease hotspots, which are defined as specific sites, times or species associations in which the infectio