A high-quality chromosome-scale Japanese flounder (Paralichthys olivaceus) genome assembly

Japanese flounder (Paralichthys olivaceus) is one of the most economically important marine flatfish cultured in China, Korea, and Japan. Herein, we produced a high-quality chromosome-scale genome assembly of Japanese flounder using PacBio Circular Consensus Sequencing (CCS) sequencing technologies. pol.gtf is the annotation file of the turbot genome assembly. pol_TPM is the gene expression matrix used for gene co-expression network inference. genes per module.xlsx is genes in every co-expression module. hub genes set.xlsx is the list of hub genes for every co-expression module. DEGs set.xlsx is the list of differential expression genes for each stress. GO enrichment.xlsx and KEGG enrichment.xlsx are the results of function enrichment for genes in co-expression modules that extremely significant correlated with each stress. key hub genes.xlsx is the list of candidate stress-related key hub genes generated by taking the intersection of hub gene set and DEGs set.