Open Targets - Data Lakehouse Ready
收藏www.targetvalidation.org2025-03-24 收录
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资源简介:
This a Parquet representation of the Open Targets Platform's <a href="https://www.targetvalidation.org/downloads/data">latest export</a>. The Open Targets Platform integrates evidence from genetics, genomics, transcriptomics, drugs, animal models and scientific literature to score and rank target-disease associations for drug target identification. The Open Targets Platform (<a href="https://www.targetvalidation.org">https://www.targetvalidation.org</a>) is a freely available resource for the integration of genetics, genomics, and chemical data to aid systematic drug target identification and prioritisation. This dataset is 'Lakehouse Ready'. Meaning, you can query this data in-place straight out of the Registry of Open Data S3 bucket. <a href="https://console.aws.amazon.com/cloudformation/home?region=us-east-1#/stacks/quickcreate?templateUrl=https%3A%2F%2Faws-roda-hcls-datalake.s3.amazonaws.com%2FOpenTargets.latest.RodaTemplate.json&stackName=OpenTargets-Latest-RODA">Deploy this dataset's corresponding CloudFormation template</a> to create the AWS Glue catalog entries into your account in about 30 seconds. That one step will enable you to write SQL with AWS Athena, build dashboards and charts with Amazon Quicksight, perform HPC with AWS EMR, or join into your AWS Redshift clusters. More detail in (the documentation)[<a href="https://github.com/aws-samples/data-lake-as-code/blob/roda/README.md">https://github.com/aws-samples/data-lake-as-code/blob/roda/README.md</a>.
本数据集为 Open Targets 平台最新导出的 Parquet 格式表示。Open Targets 平台整合了遗传学、基因组学、转录组学、药物、动物模型以及科学文献的证据,以对靶点-疾病关联进行评分和排名,从而助力药物靶点的识别。Open Targets 平台(<a href="https://www.targetvalidation.org">https://www.targetvalidation.org</a>)是一项免费资源,旨在整合遗传学、基因组学和化学数据,以辅助系统性的药物靶点识别和优先级排序。此数据集符合‘数据湖即服务’标准。换言之,您可以直接在 Open Data S3 存储桶的注册表中查询此数据。通过部署相应的 CloudFormation 模板(<a href="https://console.aws.amazon.com/cloudformation/home?region=us-east-1#/stacks/quickcreate?templateUrl=https%3A%2F%2Faws-roda-hcls-datalake.s3.amazonaws.com%2FOpenTargets.latest.RodaTemplate.&stackName=OpenTargets-Latest-RODA">部署此数据集的 CloudFormation 模板</a>),可在约 30 秒内创建 AWS Glue 目录条目至您的账户。这一步骤将使您能够使用 AWS Athena 编写 SQL 语句,利用 Amazon Quicksight 构建仪表板和图表,通过 AWS EMR 执行高性能计算,或将其与 AWS Redshift 集群进行数据合并。详细信息请参阅(文档)[<a href="https://github.com/aws-samples/data-lake-as-code/blob/roda/README.md">https://github.com/aws-samples/data-lake-as-code/blob/roda/README.md</a>]。
提供机构:
www.targetvalidation.org



