We describe a useful workflow for characterizing proteomics experiments incorporating many conditions and abundance data using the popular weighted gene correlation network analysis (WGCNA) approach a
The files serve as input and intermediate results for a MaxQuant and MsstatsTMT training on lysine methyl transferase 9 knockdown and control cell proteomics (https://doi.org/10.1186/s12935-020-1141-2
The iProClass database provides value-added information reports for UniProtKB and unique NCBI Entrez protein sequences in UniParc, with links to over 175 biological databases, including databases for
Poly(ethylene glycol) (PEG) is one of the most common polymer contaminations in mass spectrometry (MS) samples. At present, the detection of PEG and other polymers relies largely on manual inspection