Additional file 2: of Refining a steroidogenic model: an analysis of RNA-seq datasets from insect prothoracic glands

Table S2. Tabulation of 43,242 tests carried out by TransDecoder on the Cufflinks output. TransDecoder settings were adjusted to filter out ORFs encoding < 100 amino acid peptides. Columns E to I are the TransDecoder output, columns J to Q are the Cufflinks output and columns R to AC are the results of the Blastp analysis against the Bm protein reference sequences (NCBI annotation release 102). In cases where a gene model was included between the test ID coordinates (Column C), this is indicated using the nomenclature of KAIKObase ( http://sgp.dna.affrc.go.jp/KAIKObase/ ) or it is left empty. Using this criterion, we identified 3579 unmapped loci. (XLSX 13932 kb)