Data for "Testing for variation in photoperiodic plasticity in a butterfly: inconsistent effects of circadian genes between geographic scales" (Ecology and Evolution, accepted manuscript)

Raw data and analysis scripts belonging to Testing for variation in photoperiodic plasticity in a butterfly: inconsistent effects of circadian genes between geographic scales (Ecology and Evolution, accepted manuscript).

Includes data from a photoperiodic assay with larvae of the speckled wood butterfly, Pararge aegeria, as well as a small bioinformatic analysis of SNP variation in two circadian candidate genes.

List of files:

statistics_and_figures.R
Statistical analysis of phenotyping experiment; drawing figures

variant_calling.sh
Shell script for mapping sequencing reads; calling and tabulating SNPs

experiment_diapause.txt
Data from phenotyping experiment, for analysis of diapause induction

experiment_larval
Data from phenotyping experiment, for analysis of larval development

snptable_timeless
Tabulated allele frequencies for exonic SNPs in timeless

snptable_period
Tabulated allele frequencies for exonic SNPs in period