Asvs, Taxonomy & Metadata
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Amplicon sequence variants (ASVs) and associated taxonomy called using DADA2 (v1.6.0) and Silva 16S database v132, along with anonymized specimen metadata. File list: <strong>Specimen_Table.csv</strong>: contains specimen type, subject id, and study day for each specimen collected. Some specimens have data on antibiotics administered that day in the "abx_b" column. <strong>seqtab.rds</strong>: ASVs for each specimen (rownames correlate to specimen_id2 in specimen table) <strong>taxa.rds</strong>: taxonomic assignments for each ASV in seqtab.rds
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Zenodo创建时间：
2018-06-05
