Alignment for single-copy marker gene based phylogenomic reconstruction of Coxiellales, Legionellales and related lineages. Excluding ipaMAG-0156 to test for long branch attraction.
Phylogeny reconstruction of the OTUs. Newick format. Constructed with RAxML by the evolutionary placement of short sequences within an initial phylogeny of close full length sequences from SILVA datab
Although the taxonomy of Burkholderia has been extensively scrutinized, significant uncertainty remains regarding the generic boundaries and composition of this large and heterogeneous taxon. Here we
Supporting Dataset S2. Files used to infer the 16S rDNA phylogeny aimed at inferring the phylogenetic position of Clade X (shown in Supporting Figure S1). Contains alignment before and after masking,