Assembly statistics for the 9 starting genotypes of <i>Daphnia magna</i> collected originally from Finland (FASC, FBSC, and FCSC), Germany (GASC, GBSC, GCSC), and Israel (IASC, IBSC, and ICSC) and one genotype of <i>Daphnia pulex</i> (PA42 version 4.1) for which sequence data were publicly available (https://www.ncbi.nlm.nih.gov/bioproject/307976).

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