For each environment, clean reads were co-assembled using MEGAHIT v1.2.9 (parameters: --k-min 27 --k-max 147 --k-step 12) and then mapped to their assembly using Bowtie2 v2.4.4 (default parameters) to
The Bedford Basin Monitoring Program is a long-term oceanographic monitoring site in the inner portion of the Halifax Harbour which has been sampled weekly since 1992 by Fisheries & Oceans Canada. Gen
