Data Sheet 1_Forecasting multidrug-resistant organisms infection trends in a Chinese tertiary hospital (2014–2024): a comparative study of SARIMA, ETS, Prophet, and NNETAR models.zip

BackgroundInfections caused by multidrug-resistant organisms (MDROs) continue to pose serious challenges for hospital infection control, often resulting in longer hospitalizations, increased patient morbidity, and higher healthcare costs. While time series forecasting has gained traction as a tool for anticipating MDROs trends, there remains a lack of real-world studies comparing the effectiveness of different modeling approaches using hospital-based data.
ObjectiveThis study aimed to evaluate and compare the predictive performance of four time series models—SARIMA, ETS, Prophet, and NNETAR—using monthly MDROs infection data collected from a tertiary hospital in China between 2014 and 2023, with the goal of forecasting trends for 2024.
MethodsMonthly MDROs infection rates from January 2014 to December 2023 were analyzed using R software. Stationarity was assessed through unit root tests, and appropriate differencing was applied as needed. Each model was fitted to the training dataset and used to forecast infection rates for the year 2024. Model accuracy was assessed by comparing forecasted values with actual 2024 data using root mean squared error (RMSE), mean absolute error (MAE), mean absolute percentage error (MAPE), symmetric mean absolute percentage error (sMAPE), and mean absolute scaled error (MASE).
ResultsAmong the models, SARIMA produced the most consistent and reliable forecasts (RMSE = 0.0469, MAE = 0.0424, MAPE = 20.74%, sMAPE = 21.27%, MASE = 0.932), with residuals satisfying tests for independence and normality. Although the ETS model achieved lower numerical point errors (RMSE = 0.0367, MAE = 0.0305, MAPE = 14.46%, sMAPE = 14.81%, MASE = 0.670), its residual diagnostics raised concerns regarding robustness. The Prophet (RMSE = 0.0499, MAE = 0.0439, MAPE = 20.41%, sMAPE = 22.15%, MASE = 0.563) and NNETAR (RMSE = 0.0697, MAPE = 30.60%, sMAPE = 30.60%, MASE = 0.072) models captured certain aspects of the data dynamics but showed lower overall robustness compared with SARIMA.
ConclusionBased on its overall robustness and diagnostic consistency, SARIMA is recommended for short- to medium-term forecasting of MDROs infection trends. The other models, while less reliable on their own, may still be valuable for validating trends and conducting sensitivity analyses to support hospital infection control planning.