Phold INPHARED 1419 and Benchmarking Datasets Protein Structures, Genomes and Annotations
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https://zenodo.org/doi/10.5281/zenodo.16744439
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* This tarball contains all ColabFold structures, genomes, pharokka and phold (with ColabFold structures) annotations for INPHARED 1419, Tara, Cook and Crass datasets analysed and/or used for benchmarking Phold
* We anticipate the INPHARED 1419 virus protein structures may be especially useful (see supplementary information for details on the viruses we generated proteomes for), please contact george.bouras@adelaide.edu.au if you have any issues or questions
* All 1419 INPHARED viruses from unique genera have their structures in separate subdirectories within the top level `inphared_structures.tar.gz` tarball according to their RefSeq accession e.g. all structures for Gordonia phage Forza NC_070763 are in the `NC_070763` subdirectory. These proteins are from the pharokka/pyrodigal-gv gene calls (not the NCBI GenBank CDS).
* All 1419 INPAHRED viruses also have separate `.gbk` GenBank Phold annotation files within the `separate_gbks` subdirectory of the tarball `all_final_inphared_unique_genus_phold_compare_structures.tar.gz`
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Zenodo创建时间:
2025-08-05



