CosMx 6000-plex PDAC dataset

Name: CosMx 6000-plex PDAC dataset
Creator: Danaher, Patrick
Published: 2025-01-29T00:00:00+08:00

Figshare2025-01-29 更新2026-04-08 收录

胰腺癌空间转录组

肿瘤微环境分析

数据链接：

https://figshare.com/articles/dataset/CosMx_6000-plex_PDAC_dataset/28299497/1 数据链接链接失效反馈

官方服务：

资源简介：

6000plex CosMx data from PDAC tumors, as used in Figure 3 of Danaher et al. 2025, "InSituCor: exploring spatially correlations among genes conditional on the cell type landscape".

提供机构：

Danaher, Patrick

创建时间：

2025-01-29

Additional file 2: of Collagen density regulates the activity of tumor-infiltrating T cells

肿瘤微环境分析

基因表达谱

The number of reads per kilobase per million mapped (RPKM) for all RefSeq annotated genes. (XLSX 5563 kb)

Figshare2019-03-14 更新40

RNA-sea of Smad4 wild-type or Smad4 knockout KPC PDAC organoids from monocultures or co-cultures with pancreatic stellate cells and RNA-seq of flow-sorted PSCs from the same co-cultures.. RNA-sea of Smad4 wild-type or Smad4 knockout KPC PDAC organoids from monocultures or co-cultures with pancreatic stellate cells and RNA-seq of flow-sorted PSCs from the same co-cultures.

胰腺转录组学

肿瘤微环境分析

RNA-sequencing of flow-sorted Smad4 wild-type (WT) or Smad4 knockout (KO) KPC (i.e. KRASG12D; p53 mutant) pancreatic ductal adenocarcinoma (PDAC) organoids from monocultures or co-cultures with pancre

NIAID Data Ecosystem20

Integrative spatial and single-cell transcriptomics elucidate programmed cell death-driven tumor microenvironment dynamics in hepatocellular carcinoma

肿瘤微环境分析

癌症预后建模

This dataset contains all key experimental and analytical materials supporting the study of programmed cell death (PCD) mechanisms and prognostic modeling in hepatocellular carcinoma (HCC). Provided r

NIAID Data Ecosystem10

Single-nuclei transcriptome profiling characterizes tumor microenvironment landscape in murine melanoma model

肿瘤微环境分析

转录组测序

Melanoma is one of the most aggressive forms of human tumors, although highly curable if diagnosed at an early phase. Despite many advances in targeted therapy and immunotherapy, the development of re

NIAID Data Ecosystem30

Additional file 3 of Tumor microenvironment remodeling after neoadjuvant immunotherapy in non-small cell lung cancer revealed by single-cell RNA sequencing

肿瘤微环境分析

单细胞RNA测序

Additional file 3: Table S2. Gene list of function modules.

Figshare2024-02-08 更新20