Derived data and analysis code for tendon-injury transcriptomic datasets

This record contains compact reproducibility materials for a secondary analysis of public single-cell, spatial, and bulk transcriptomic datasets of tendon injury. The archive includes exact-execution scripts, portable variants for core analyses, derived tables, logs, provenance records, figure source data, and checksums. The materials are derived from public datasets GSE163446, GSE216214, and GSE235861, with structural inputs including PDB 1M2Z. Creators: Xingyun Li (ORCID: 0009-0004-0551-2002), Donghao Han, and Haiyan Mao; all are affiliated with Tianshui Normal University, Tianshui, Gansu, China. Xingyun Li and Donghao Han contributed equally and are joint first authors, listed in that order. Haiyan Mao is the corresponding author. Author-generated derived data, result tables, documentation, and figures are made available under Creative Commons Attribution 4.0 International (CC BY 4.0). Author-generated analysis code is made available under the MIT License. Reused GEO, PDB, L1000FWD, and other third-party materials remain subject to their original providers' terms.