Text S1 - Quantifying the Diversification of Hepatitis C Virus (HCV) during Primary Infection: Estimates of the In Vivo Mutation Rate

In Text S1 in online supporting information, we show that our results are robust regarding our choices for the maximum number of replication complexes, the initial delay after a cell is infected and before virus is produced and the fraction of lethal mutations. We also present details of the estimation of mutation rate using the frequency of stop codons.
(PDF)