Dataset for Plectrocnemia conspersa
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For detailed methods see Annotated Draft Genomes of Two Caddisfly Species Plectrocnemia conspersa CURTIS and Hydropsyche tenuis NAVAS (Insecta: Trichoptera) Jacqueline Heckenhauer, Paul B Frandsen, Deepak K Gupta, Juraj Paule, Stefan Prost, Tilman Schell, Julio V Schneider, Russell J Stewart, Steffen U Pauls Genome Biology and Evolution, Volume 11, Issue 12, December 2019, Pages 3445–3451, https://doi.org/10.1093/gbe/evz264Supplementary materialfull_table_PO2_busco.tsv - BUSCO outputPO2_final_draf_assembly.fasta.masked - masked assembly PO2_consensi.fa.classified - Repatmodeler resultsPO2_final_draf_assembly.fasta.tbl - Repeatmasker resultsPO2_final_draf_assembly.fasta.out.gff3 - gff file of repeatsPO2_blat_output.psl - blat resultsPO2_hints_RM_E.gff3 - blat and repeatmasker hints for augustusPO2_augustus_all.gff3 - gff file of the protein coding sequencesPO2_augustus_all3.aa - annotation file with protein coding sequences from augustusPO2_augustus_all.cds.fa_renamed - predicted protein coding sequences (renamed)PO2_augustus_all3.aa_renamed - predicted peptides (renamed)PO2_augustus_all3.aa_dict - table of renamed contigs (peptides)PO2_augustus_all.cds.fa_dict - table of renamed contigs (predicted protein coding sequences)annotations.gff3 - gff file of blast2go annotationsannotated_genes.fasta - blast2go annotationed genesannotation_table.txt - blast2go annotation tablePO2_augustus_all3.aa_renamed.xml - functional annotation: InterPro
创建时间:
2020-11-18



