Supplementary data files for Manzano-Marín et. al. 2023 "Evolution of an alternative genetic code in the Providencia symbiont of the haematophagous leech Haementeria acuecueyetzin"

The data set consists of siz folders:

1) "genome_data": GenBank-formatted annotation files for newly sequenced Providencia siddallii endosymbionts.

2) "orthoMCL_data": Flat-text output files from the OrthoMCL pipeline.

3) "phylongey": MrBayes run files for Providencia spp. Bayesian phylogenetic inference.

4) "UGA_proteins_and_genes": FASTA-formatted alignments of UGA-containing protein-coding gene sequences from figure 3 and table 3.

5) "RepeatModeler_Prsiddallii": FLog files for RepeatModeler runs of P. siddallii genomes.

6) "checkM2_Psiddallii": checkM2 input and output files for P. siddallii protein sets.