The regulatory landscape of the yeast phosphoproteome

Supplementary Table 1: Treatment, sample preparation and measurement information for all analyzed samples. Supplementary Table 2: Ultra-deep reference yeast phosphoproteome. Supplementary Table 3: Complete and not batch corrected, quantitative phosphosite datasets. Supplementary Table 4: Proteome quantitation of 30 selected perturbations and differential expression of proteins versus untreated. Supplementary Table 5: Batch corrected quantitative core phosphoproteome dataset. Supplementary Table 6: Differential expression of phosphosites in all perturbations versus the untreated control. Supplementary Table 7: Perturbation-specific phosphosites. Supplementary Table 8: Phosphosites associated with TOR subnetworks. Supplementary Table 9: Catalog of characterized, co-regulated phosphosites, assembled in modules.