Additional file 3 of A comprehensive overview of bull sperm-borne small non-coding RNAs and their diversity across breeds

Additional file 3: Table S1. The Sperm miRnome. Catalogue of miRNAs of bovine frozen sperm. Table S2. Sperm rRNAs. Catalogue of rRNAs of bovine frozen sperm. Table S3. Sperm tRNAs. Catalogue of tRNAs of bovine frozen sperm. Table S4. Sperm piRNAs. Catalogue of piRNAs of bovine frozen sperm. Table S5. Other sperm small RNAs. Catalogue of other small non coding RNA (without rRNA, tRNA and piRNAs) Table S6. Sperm mRNAs. List of reads corresponding to mRNA fragments of ejaculated bovine sperm. Table S7. Table of miRNAs expression in bovine frozen sperm. Table S8. miRNA genomic clusters. List of genomic clusters identified in bovine sperm. Table S9. Expression correlations between miRs. Table S10. Expression correlations between miRs located in genomic clusters. Table S11. Expression of sperm isomiRs across 6 cattle breeds. Table S12. Distribution of isomiRs expression levels and contribution to miRNA expression (%). Table S13. Details (expression and changes) about isomiRs accounting for more than 1% of each miRNA expression level. Table S14. DeSeq 2 results. List of sncRNAs differentially expressed between breeds. Table S15. RTqPCR validation: list of LNA primers, normalized expression and statistics. Table S16. Sperm functional parameters across breeds. Table S17. Comparison of DEmiR across breeds and DEmir published in Capra et al. Table S18. Correlation of sperm parameters with miRNAs and piRNAs expression across breeds. Table S19. Comparison of miRNA content and expression with Capra et al.