Datasets for Léonard et al. ToRQuEMaDA: Tool for Retrieving Queried Eubacteria, Metadata and Dereplicating Assemblies
收藏DataCite Commons2021-03-15 更新2024-07-28 收录
下载链接：
https://figshare.com/articles/dataset/Datasets_for_L_onard_et_al_ToRQuEMaDA_Tool_for_Retrieving_Queried_Eubacteria_Metadata_and_Dereplicating_Assemblies/13238936/1
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资源简介：
This archive provides details on the <b>8 datasets</b> referenced in <b>Table 1</b> of the article:A. Bacteria (49 orgs)<br>B. Bacteria (151 orgs)<br>C. Actinobacteria (20 orgs)D. Bacteroidetes (37 orgs)E. Chlamydia (32 orgs)F. Cyanobacteria (46 orgs)G. Firmicutes (22 orgs)H. Proteobacteria (36 orgs)<br>It contains 5 directories:- <b>tables</b> are the TSV tables with the taxonomic details and the FTP download links- <b>42-reports</b> are the TSV contamination reports by our software Forty-Two (see https://metacpan.org/pod/Bio::MUST::Apps::FortyTwo)- <b>kronas</b> are the HTML taxonomic plots generated with Krona (see https://github.com/marbl/Krona/)- <b>supermatrices</b> are the FASTA supermatrices of ribosomal proteins- <b>trees</b> are the Newick trees computed by IQ-TREE
提供机构：
figshare
创建时间：
2020-11-15
