Effect of Tup1 and Isw2 on nucleosome positions in stationary phase.
收藏Alliance of Genome Resources2026-08-01 收录
官方服务:
资源简介:
We used MNase-seq to measure nucleosome positions in wild type, tup1 knockouts, and isw2 knockouts.
应用场景:
相关数据集
PBRM1-deficient PBAF complexes target de novo genomic loci to activate pro-survival genes in clear cell renal cell carcinoma (BRG1 dataset)
PBRM1 is lost in 40% of clear cell renal cell carcinomas (ccRCC) and the combined loss of VHL and PBRM1 drives ccRCC tumorigenesis. PBRM1 is an accessory subunit of the PBAF subclass of the SWI/SNF ch
NIAID Data Ecosystem20
Differential requirements for the BAF and ncBAF subfamilies of the mammalian SWI/SNF chromatin remodeling enzymes during skeletal muscle differentiation.. Differential requirements for the BAF and ncBAF subfamilies of the mammalian SWI/SNF chromatin remodeling enzymes during skeletal muscle differentiation.
Subunit proteins BAF250a and Brd9 are specific to mammalian SWI/SNF subfamilies BAF and ncBAF respectively. We have performed RNA-seq analysis for C2C12 myoblasts stably knocked down for each subunits
NIAID Data Ecosystem10
A role for Snf2 related nucleosome spacing enzymes in genome-wide nucleosome organization
The positioning of nucleosomes within the coding regions of eukaryotic genes is aligned with respect to transcriptional start sites. This organization is likely to influence many genetic processes, re
NIAID Data Ecosystem10
INO80 requires a polycomb subunit to regulate the establishment of poised chromatin in murine spermatocytes
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
NIAID Data Ecosystem20
CHD chromatin remodelers regulate separate gene sets and distinct stages of Dictyostelium development. Dictyostelium discoideum
We utilized RNA-seq to profile expression levels in wild type AX2 cells and three mutants for the CHD family of ATP-dependent chromatin remodellers in Dictyostelium discoideum. Total RNA was polyA enr
NIAID Data Ecosystem10



