Global Quantitative Mapping of Enhancer Activity in Rice Genome by STARR-seq
收藏NIAID Data Ecosystem2026-05-26 收录
官方服务：
资源简介：
Detect the enhancers in rice by STARR-seq method
应用场景：
创建时间：
2018-10-11
相关数据集
STARR-seq based mutagenesis of transcription factor binding sites. STARR-seq based mutagenesis of transcription factor binding sites
We performed a STARR-seq based, massively parallel reporter assay on reference genome and mutation-containing oligonucleotide sequences from regions associated with a large number of transcription fac
NIAID Data Ecosystem80
Additional file 4 of STARRPeaker: uniform processing and accurate identification of STARR-seq active regions
Additional file 4: Supplementary Table S3. List of data sources and accession numbers used for the analysis.
DataCite Commons2024-02-14 更新80
Additional file 6 of STARRPeaker: uniform processing and accurate identification of STARR-seq active regions
Additional file 6: Supplementary Table S5. Sensitivity analysis of using alternative parameters against default parameters (bin 500 bp, step 100 bp, min 200 bp, max 1000 bp) using the HepG2 rep1 datas
DataCite Commons2024-02-14 更新70
STARR-seq enhancer activity in mouse embryonic stem cells cultured in 2i+LIF or serum+LIF [STARR-seq]
Enhancers are distal regulators of gene expression that shape cell identity and regulate cell fate transitions. Mouse embryonic stem cells (mESCs) are a typical example of cells whose pluripotent iden
NIAID Data Ecosystem80
Additional file 19 of Constructing eRNA-mediated gene regulatory networks to explore the genetic basis of muscle and fat-relevant traits in pigs
Additional file 19: Table S10. The list of selected SNPs for STARR-seq experiments.
Figshare2024-08-18 更新70
