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Chromosome conformation for wild type, eco1-aa, cdc6-mn and eco1-aa cdc6-mn strains arrested in meiotic prophase I

Alliance of Genome Resources2026-08-01 收录

减数分裂染色体构型

Hi-C数据分析

数据链接：

https://www.yeastgenome.org/dataset/GSE196132 数据链接链接失效反馈

官方服务：

资源简介：

High-resolution Hi-C in meiotic prophase I arrested cells

应用场景：

三维基因组学

Hi-C数据分析

Test dataset for HiCube. HiCube is a lightweight web application for interactive visualization and exploration of diverse types of genomics data at multiscale resolutions. Especially, HiCube display

NIAID Data Ecosystem60

Hi-C Analyses with GENOVA: a case study with cohesin variants. Hi-C Analyses with GENOVA: a case study with cohesin variants

Hi-C数据分析

黏连蛋白功能研究

Conformation capture-approaches like Hi-C can elucidate chromosome structure at a genome-wide scale. Hi-C datasets are large and require specialised software. Here, we present GENOVA: a user-friendly

NIAID Data Ecosystem30

GOTHiC, a probabilistic model to resolve complex biases and to identify real interactions in Hi-C data

Hi-C数据分析

基因组三维结构

Hi-C is one of the main methods for investigating spatial co-localisation of DNA in the nucleus. However, the raw sequencing data obtained from Hi-C experiments suffer from large biases and spurious c

NIAID Data Ecosystem20

Figure 2. Metagenomic Hi-C associations.

微生物基因组互作

Hi-C数据分析

The log-scaled, normalized number of Hi-C read pairs associating each genomic replicon in the synthetic community is shown as a heat map (see color scale, blue to yellow: low to high normalized, log s

Figshare2016-01-18 更新30

Additional file 4: of ChiCMaxima: a robust and simple pipeline for detection and visualization of chromatin looping in Capture Hi-C

染色质环检测

Hi-C数据分析

Table S1. List of mES interactions called by ChiCMaxima from two CHi-C replicates. (XLSX 1734 kb)

NIAID Data Ecosystem20