Script files - the "aukward" use of hidden Markov models in a pursuit-diving seabirds: semi-supervised HMMs improve behavioural classification and inference in auks

These are the two cleaned datasets outlining the data formatting process and the HMM/TEE analysis. These have been cleaned to only include aspects of the analysis covered in the publication. Please do not hesitate to email me for further information. Link to article: https://link.springer.com/article/10.1186/s40462-026-00658-6