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Alignment of archaeal marker genes

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Figshare2019-07-02 更新2026-04-08 收录
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https://figshare.com/articles/Alignment_of_archaeal_marker_genes/8411864/1
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资源简介:
FASTA file of the alignment underlying the phylogenetic tree that appears in Figure 3 of Santoro et al. 2019. The alignment is constructed from 32 concatenated proteins from 1360 archaeal genomes, including metagenome-assembled genomes, single-cell genomes, and cultivated isolates obtained from NCBI GenBank and the Joint Genome Institute's Integrated Microbial Genomes (IMG) portal. Phylogenetic markers were selected using hmmsearch against AMPHORA2 markers.
提供机构:
R. Alexander Richter
创建时间:
2019-07-02
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