Phylogenetic tree computed from the core gene alignment of the 2,302 complete E. coli from RefSeq (command MSA in Ppanggolin). The tree was computed with Iqtree 1.6.12 (PMID: 25371430) using
Core-genome based phylogenetic analysis of high-level aminoglycoside resistance (HLAR) Enterococcus faecalis using draft whole-genome sequence by MiSeq, Illumina.