This file stores all mutations that were identified in the sequenced genomes of the LTEE, expect the ones in masked regions or in the neighbourhood of IS elements. It is used to compute most mutation
Table S1. (ID classification): Small insertions and deletions are classified into 83 mutational channels. This classification considers the size of the ID and the repeat size surrounding the event. Ev
List of the mutated sites of the hg19 reference genome used in de Filippo et al. "Quantifying and reducing spurious alignments for the analysis of ultra-short ancient DNA sequences".