Additional file 2 of Spatially distinct molecular patterns of gene expression in idiopathic pulmonary fibrosis

Additional file 2: Datafile S1.  Differential expression results for main comparisons of interest (IPF normal appearing lung parenchyma vs control normal lung parenchyma, IPF normal bronchiolar vs control normal bronchiolar, IPF transition zones of fibrosis vs IPF normal appearing lung parenchyma, IPF dense fibrosis vs IPF normal appearing lung parenchyma and IPF honeycomb epithelium metaplasia vs IPF normal bronchiolar.  All gene lists are adjusted for batch and cell proportions of AECI, AECII, fibroblasts and ciliated.  ***Denotes McDonough core IPF gene.