Additional file 1: of Genomic characterization of MDR/XDR-TB in Kazakhstan by a combination of high-throughput methods predominantly shows the ongoing transmission of L2/Beijing 94–32 central Asian/Russian clusters

Table S1. detailed TB-SPRINT results on 700 MTC DNA samples from Kazakhstan (n = 677 spoligotypes including 3 potential “mixed infection”, 23 failed). Table S2. detailed TB-SNPID results on 470 MTC DNA samples from Kazakhstan (n = 543 analysed, 73 failed). Table S3. Lineage and Sublineage assignation of Spoligotyping results (n = 677). Table S4. All isolates (n = 93) of “set1” (i.e. chronologically first set) typed by two methods: TB-SPRINT and TB-SNPID. Table S5. Detailed results for n = 391 samples run both by TB-SPRINT and TB-SNPID. Table S6. Analysis of discrepant drug-resistance results between TB-SPRINT and TB-SNPID on the 391 set of isolates. Table S7. congruence between SigE and RD131 (TB-SNPID) results in Aktobe suggests the presence of a single DST L2/Beijing 94–32 clone. Table S8. Chi2 square statistics on L2/L4 prevalence in some regions of Kazakhstan. (XLSX 318 kb)